CoVMT Variant Detection
COVID-19 Virus genome sequence analysis; detection of variants in full/partial SARS-CoV-2 sequences
Upload a full or partial genome sequence of SARS-CoV2 [see an example sequence]
[see report for the above example sequence]
Input contig/genome will be aligned to SARS-CoV-2 reference genome and mutations will be compared to the latest set of Mutation Fingerprints in CovMT to derive variant information. Variant detection is executed by the CBRC BEACON variant detection webservice.

Gene #mutations
(*) Mutations shared with SARS-like genomes
(#) Mutations related to the immune escape, reference.